GlyCLICK enables site-specific and quantitative conjugation of IgG from several species and subclasses with a degree of label (DOL) of 2. PDF FISH Tag™ DNA Kit - Thermo Fisher Scientific These values are very similar to those of the Cy5 dye. #1260 (labeling kit) iFluor™ 647 649 nm 664 nm Alternative to Cy5®, Alexa Fluor® 647 and DyLight™ 650 Strong fluorescence More photostable than Cy5® #1031 (SE, NH 2-reactive) #1055 (maleimide, SH-reactive) #1235 (labeling kit) Superior Alexa Fluor® Dyes Compared to traditional dyes, Alexa Fluor® dyes are brighter, more photostable, and more pH resistant between pH 4 and 10. . 1. Multiple antibodies labeled with different dyes using Mix-n-Stain kits can be used for multicolor fluorescence staining without transfer of dyes between antibodies. 550/565 Orange Alexa Fluor 546 Cy3 HOOK™ 645 Dye 648/667 Red Alexa Fluor 647 Cy5 * Conjugation to an IgG antibody . The exact degrees of labeling are reported on the specification sheet for each product lot. The degree of labeling (DOL) was the same for both variants. dTTP to generate a degree of dye labeling that provides optimal S/N in hybridization. Alexa Fluor®, Pacific Blue™, and Pacific Orange™ Antibody Labeling Kits | 5 Determining the Degree of Labeling 3.1 Dilute a small amount of the purified conjugate into PBS or other suitable buffer and measure the absorbance in a cuvette with a 1-cm pathlength at 280 nm (A 280) and the absorbance maximum (λ max) for the respective dye (A dye Prepare a 10 mg/mL AF647 maleimide [equivalent to Alexa Fluor™ C2 647 maleimide] labeling solution. Alexa Fluor 594 is most efficiently excited by a 561nm diode laser or a 594nm diode laser. The Alexa Fluor 555 and the Alexa Fluor 647 dyes in protein conjugates exhibited significantly less of this self-quenching, and therefore the protein conjugates of Alexa Fluor dyes were significantly more fluorescent than those of the Cy dyes, especially at high degrees of labeling. labeling of DNA, RNA or proteins. The degree of labeling (DOL the number of moles of dye incorporated per mole of protein) provided by the manufacturers for each of the Cy3 and Cy5 conjugates was compared to the DOL determined independently for this study. Although the subset of fluorophores that are advantageous in confocal microscopy is rapidly growing, many of the traditional probes that have been useful for years in widefield applications are still of little utility when constrained by fixed-wavelength laser spectral lines. CF647 The degree of labeling (DOL) for the anti-EGFR NBs 7D12 and 7D12-R2 was 0.55. Common proteins include IgG, BSA, PE, APC and streptavidin. dyes Alexa Fluor dyes are brighter more photostable and more pH resistant between pH 4 and 10 And generally when using Alexa Fluor dyes higher degrees of labeling can be achieved without intramolecular quenching For details see Alexa Fluor Dyes Spanning the Visible and Infrared . We recommend trying three different degrees of labeling, using three different molar ratios of the reactive reagent to protein. These kits can be ordered with several different fluorophores, so you are not limited to Alexa 647. 660™ 663/690 : Cy5.5 dye, APC However, the degree of labeling (DOL) has to be kept below 6−8 dyes per antibody to minimize quenching effects and retain a high binding specificity and affinity.19,20 Usually antibodies are optimized for high brightness and efficient binding to their corresponding epitopes, which typically results in DOLs of 2−5.16,20 Received: July 21, 2020 The only minor concern about this kit is that it recommends the protein to be rather concentrated, at 2 mg/ml (1 mg of . 031-728-3233 E-mail. V e rsi on 0 8/3 21 Sp t-L ab l ®A x Fu 56 Spot-Label® Alexa Fluor® 568 Product code: ebAF568 Properties Des cription An ti-Sp oT ag® V H(bv le) j ud x F r® 568. • For protein samples already in a volume of appropriate buffer, add 1/10 volume of The degree of labeling for each conjugate is typically 2-8 fluorophore molecules per IgG molecule; the exact degree of DNA to varying degrees with Alexa Fluor 647 ULS labeling reagent and Cy5 ULS labeling reagent. Protein labeling Labeling customer-provided protein with fluorophore (Alexa Fluor™ 488 or Alexa Fluor™ 647, clean-up, determination of degree of labeling, QC by Fluidity One-W). When the Alexa Fluor 647 NHS-labeled 'Enhancer' was applied to XL177 cells (which lack a GFP-target), we again observed very strong background (Figure 6d). Background Isotype control antibodies are used to estimate the nonspecific binding of target primary antibodies due to F c receptor binding or other protein-protein interactions. Form Buffered aqueous solution. Superior Alexa Fluor™ Dyes Compared to traditional dyes, Alexa Fluor™ dyes are brighter, more photostable, and more pH resistant between pH 4 and 10. Consistency will be mainly influenced by the source of . Two of these techniques employ site-specific antibody labeling to screen for and further characterize internalizing clones. (B) The GST-based assay used to determine the binding specificity of the PHD-fingers. The envelopes were labeled with X222 antibodies (Gajewski et al., 1996) directed against gp210 for 45 min, washed for 10 min in PBS and incubated with Alexa-647-labeled F(ab′) 2 fragments [Life Technologies, A-21237; degree of labeling (DOL) of ∼3.5] of goat anti-mouse-IgG antibody for 30 min. This solution gives pH ~ 8.3. Shop Invitrogen™ Alexa HA also mediates membrane fusion between the virus and a cell, which is the first critical step during infection. with CF®750, Alexa Fluor® 750 or Cy®7. The Degree of Labeling (DOL), sometimes called Degree of Substitution (DOS), is a particularly useful parameter for characterizing and optimizing bioconjugates, such as fluorophore-labeled proteins. Alexa Fluor® 647 dye is spectrally similar to Cy5 dye and has far-red emission not visible to the human eye. Alexa Fluor® 555 and Alexa Fluor® 647 are increasingly promoted as replacements for CyDye™ in microarray experiments. Resolution Degree of Labeling of the Antibody . Atto 647 belongs to a new generation of fluorescent labels for the red spectral region. > alexa 647 labeling kit. For details see Alexa Fluor™ Dyes Spanning the Visible and Infrared Spectrum—Section 1.3. 3. Additionally, we demonstrate synthesis of An isotype control antibody should have the same . . 0 20000 40000 60000 80000 100000 0 2 4 6 8 Fluorescence Degree of Labeling (DOL) CF®750 Cy®7 Alexa Fluor® 750 The Alexa Fluor® 647 dye must be viewed using a fluorescence microscope . Because CF®750 is highly water soluble, a higher degree of labeling (number of dyes per protein) can be achieved without fluorescence quenching, resulting in brighter conjugates. 4. The Alexa Fluor 555 and the Alexa Fluor 647 dyes in protein conjugates exhibited significantly less of this self-quenching, and therefore the protein conjugates of Alexa Fluor dyes were significantly more fluorescent than those of the Cy dyes, especially at high degrees of labeling. Of interest is the degree of labeling, or the fluorophore-to-protein (FTP) ratio. Probes were then used for dot blot hybridization comparisons using standard procedures and stringent wash conditions. Accessory Reagents. alexa 647 labeling kit (Thermo Fisher . Table 1: Fluorescent Dyes used in the kits comparable to Alexa Fluor dyes HOOK™ Dye . background in the Alexa Fluor® 647 or APC channel. Introduction. Co m at ib lw hN -d r g, Cell nuclei are stained with Hoechst (blue) while the micelles are visualized by NHS-Alexa fluor 647 in B (red) and maleimide-Alexa flour C5 568 in D (orange). Add 50 μL of 1 M sodium bicarbonate to 0.5 mL of 2 mg/mL NT-Lys. Co m at ib lw hN -d r g, Alexa 647-Labeled Proteins. HaloTag ® and SNAP-tag ®. technical@dawinbio.com 카카오톡 플러스친구 ID. Alexa Fluor® 647 650 668 . Degree of labeling (DOL) 2 fluorophores per Nanobody. V e rsi on / 0 621 Sp t-L ab l ®A x Fu 47 Spot-Label® Alexa Fluor® 647 Product code: ebAF647 Properties Des cription An ti-Sp oT ag® V H(bv le) j ud x F r® 647. Higher FTP ratios (e.g., >5), especially for Alexa 647, led to higher background noise and overall poor signals (data not shown). Proteins can be sourced directly on customer's behalf at cost where third-party licence agreements permit. Alternatively, while FITC is not a very bright fluorophore, it emits into a channel with little background and is commonly conjugated to most commercially available antibodies. The resulting Alexa Fluor® conjugate will exhibit brighter . Alexa Fluor 647 is conjugated to NT-Lys using Alexa Fluor 647 protein labeling kit targeted to primary amines, following the manual of the manufacturer. The results from our flow cytometry, immunocytochemistry, and . S5 Fig: Effect of primary and secondary DOL on counting outcome.The plots show the results of an analysis on the dataset of tubulin labeled with a secondary antibody (AB) labeling scheme shown in Fig. $195.00. Both dyes are easily distinguishable to the human eye and the low degree of spectral overlap should yield good results with minimal bleed-through in dual labeling experiments, provided the concentrations of each probe are similar in the specimen. And generally when using Alexa Fluor® dyes, higher degrees of labeling can be achieved without intramolecular quenching. The Degree of Substitution (DOS) is the most important factor for characterizing dye-labeled protein. Alexa Fluor® 488 Protein Labeling Kit | 4 3.3 Calculate the degree of labeling: moles dye per mole protein = A 494 × dilution factor where 71,000 cm-1M is the approximate molar extinction coefficient of the Alexa Fluor® 488 dye at 494 nm. Performance relates to the molecular and steric similarities, which will vary for each new pair of dyes as well as the spectral integrity for the specific application required. The absorption maximum of Alexa Fluor® 647 occurs near 650 nm, and the emission maximum is near 668 nm. Enter the amount of label (in mg) you wish to use1 2. In a suitable container, dissolve 1 mg of AF647 maleimide [equivalent to Alexa Fluor™ C2 647 maleimide] in 100 µL of DMSO to make a labeling solution with a concentration of 10 mg . iFluor 594 180000 587 604 0.53 0.05 0.04 Texas Red®, Texas Red-X, Alexa Fluor® 594 and DyLight™ 594 iFluor 610 110000 605 623 0.85 0.32 0.49 Alexa Fluor® 610 iFluor 633 250000 638 653 0.29 0.062 0.044 Alexa Fluor® 633 iFluor 647 250000 648 664 0.25 0.03 0.03 Cy5®, Alexa Fluor® 647 and DyLight™ 650 Degree of Labeling The degree of labeling of the dextran conjugate is indicated on the container's label. antibodies and ADCs in live cells. Common dyes include Alexa Fluor, DyLight, mFluor, iFluor and others. Alexa Fluor® conjugated primary antibody 자세히 보기 Antibody Conjugation/labeling Kits 보기 * 학술 문의 Tel. Also, unlike the Cy5 dye, the Alexa Fluor 647 dye has very little change in absorption or fluorescence spectra when conjugated to most proteins, oligonucleotides, or nucleic acids, thus yielding greater total fluorescence at the same degree of labeling. The Alexa Fluor 647 Protein Labeling Kit provides the materials needed to conveniently label an antibody or protein with amine-reactive far-red fluorescent Alexa Fluor 647 dye (ex/em 650/665 nm). Common proteins include IgG, BSA, PE, APC and streptavidin. . Target / S pecificity pot-Tag® s equ nc (PD R VA SHW ). 647 Alexa Fluor . For IgGs, we find that labeling with 3-7 moles of Alexa Fluor ™ 647 dye per mole of antibody is optimal in many applications. The Alexa Fluor® 647 dye is readily excited by the 594 nm or 633 nm laser lines. Plus shipping costs $45.00. Common dyes include Alexa Fluor, DyLight, mFluor, iFluor and others. (A) Degree of Alexa-647 labeling of the antibody formats. Degree of labeling is higher than expected . The degree of labeling for each conjugate is typically 2-8 fluorophore molecules per IgG molecule; the exact degree of labeling is indicated on the certificate of analysis . This purified antibody was conjugated to Alexa Fluor ® 647 under optimal conditions with a degree of labeling of 2-6. Typically this value is one-half to one dye per dextran in the 3,000 MW range; one to two dyes per Alexa Fluor 647 dye molecules can be attached to proteins at high molar ratios without significant self-quenching, enabling brighter conjugates and more sensitive detection. Target / S pecificity pot-Tag® s equ nc (PD R VA SHW ). Although the subset of fluorophores that are advantageous in confocal microscopy is rapidly growing, many of the . Thermo Fisher alexa fluor 488 647 protein labeling kit Molecular Probes Protein Labeling Kits provide a convenient means for attaching a fluorescent label or biotin to an antibody or a protein larger than 40 kDa Conjugates are ideal for multiple applications including flow cytometry fluorescent microscopy immunohistochemistry primary detection ELISAs immunocytochemistry FISH and more Kits are . Storage buffer ( B ) Quantification of Alexa Fluor 647-conjugated RN2N fluorescence intensity in peripheral organs of sonicated 2N tau-overexpressing pR5 . B = biotin; SA = streptavidin; 647 = Alexa Fluor-647 (C,D) Raw images for the PHD 1 and PHD 2 screens (left panels). The Alexa Fluor® 647 dye is readily excited by the 594 nm or 633 nm laser lines. The NHS ester (or succinimidyl ester) of Alexa Fluor® 647 is the most popular tool for conjugating this dye to a protein or antibody. M of Alexa Fluor ™ 647 dye at 650 nm. The Alexa Fluor 647 reactive Materials Kit Contents Alexa Fluor 647 dye molecules can be attached to proteins at high molar ratios without significant self-quenching, enabling brighter conjugates and more sensitive detection. Alexa Fluor 647 dye molecules can be attached to proteins at high molar ratios without significant self-quenching, enabling brighter conjugates and more sensitive detection. 10 μL ABIN6810548. IF, SRM, WB . antibody with a degree of labeling of 4-6 dye molecules per antibody molecule. In contrast, its Alexa Fluor 647 maleimide-labeled counterpart behaved like a perfect negative control. NHS ester can be converted to relevant substrate for use in self-labeling tag systems, e.g. adrenoceptor beta 1, ADRB1R and B1AR and BETA1AR and RHR, ADRB1 and IDBG-90231 and ENSG00000043591 and 153, norepinephrine binding, nuclei, Adrb1 and IDBG-179107 and ENSMUSG00000035283 and 11554, BT.79981 and IDBG-648826 and ENSBTAG00000001242 and 281604 NHS esters can be used to label to the primary amines (R-NH 2) of proteins, amine-modified oligonucleotides, and other amine-containing molecules. Within each numbered box a peptide is arrayed 16 times in a 4×4 spot grid to account for surface and spotting irregularities. game, CA). #1260 (labeling kit) iFluor™ 647 649 nm 664 nm Alternative to Cy5®, Alexa Fluor® 647 and DyLight™ 650 Strong fluorescence More photostable than Cy5® #1031 (SE, NH 2-reactive) #1055 (maleimide, SH-reactive) #1235 (labeling kit) Alpaca anti-mouse IgG2b, Fc-specific recombinant V H H is an anti-mouse IgG subclass specific antibody. Alexa Fluor 647 dye molecules can be attached to proteins at high molar ratios without significant self-quenching, enabling brighter conjugates and more sensitive detection. The Alexa Fluor® 647 Protein Labeling Kit provides an easy and fast way to efficiently label a protein with a fluorescent dye. The tandem conjugates analyzed were Alexa Fluor 647 R-PE SA, Alexa Fluor 680 APC SA, Alexa Fluor These values are very similar to those of the Cy5 dye. The specificity of GlycINATOR allows for the complete deglycosylation of all IgG Fc-glycoforms and does not require any prior engineering of the amino acid . The degree of labeling (DOL) values . Note that this can be provided as a standalone service. We offer Alexa Fluor 647 dye conjugated to a variety of antibodies, peptides, proteins, tracers, and amplification substrates optimized for cellular labeling and detection. Determination of cross-reactivity,subclass specificity, sequence, affinity, melting point, and degree of labeling (DOL) Affinity (K D) CTK0103: K D =0.13 nM, CTK0104: K D = 0.63nM. Article Snippet: NHS-Alexa Fluor 647 and maleimide-Alexa flour C5 568 fluorescent dyes were obtained from Invitrogen (Eugene, OR, U.S.A.). The Degree of Labeling (DOL), sometimes called Degree of Substitution (DOS), is a particularly useful parameter for characterizing and optimizing bioconjugates, such as fluorophore-labeled proteins. Superior Alexa Fluor™ Dyes Compared to traditional dyes, Alexa Fluor™ dyes are brighter, more photostable, and more pH resistant between pH 4 and 10. Description. This kit is optimized for labeling 1 mg of IgG antibody per reaction with Alexa Fluor 647. The effects of DOL on factors such as signal- The Degree of Substitution (DOS) is the most important factor for characterizing dye-labeled protein. 1. * 1 2. For IgGs, we find that labeling with 4-9 moles of Alexa Fluor® 488 dye per Because the degree of labeling (DOL) of cell-bound antibodies, often required in quantitative fluorescence measurements, is largely unknown, we investigated the effect of labeling with two different fluorophores (AlexaFluor546, AlexaFluor647) in a systematic way using antibody stock solutions with different DOLs. Traditional The exact degrees of labeling are reported on the specification sheet for each product lot. The exact degrees of labeling are reported on the specification sheet for each product lot. the Alexa 647 dye is pH insensitive between 4 and 10, and un-like Cy™5 dye, resistant to quenching at high degrees of substi-tution. Unlike Cy5 dye, the Alexa Fluor 647 dye is resistant to quench-ing at high degrees of labeling.1 Each of the vials of Alexa Fluor 647 succinimidyl ester supplied in the kit is sufficient for labeling one sample (20-100 µg at a concentration of 1 mg/ml) of protein that has a molecular weight between ~12 and ~150 kDa. And generally when using Alexa Fluor™ dyes, higher degrees of labeling can be achieved without intramolecular quenching. 10 μL ABIN6810548. 50 μL ABIN6810549. The degree of labeling for each conjugate is typically 2-8 fluorophore molecules per IgG molecule; the exact degree of labeling is indicated on the certificate of analysis . As a first step, we prepared covalent conjugates between all three … Calculate the degree of labeling: Where 239,000 is the molar extinction coefficient (ε) in cm-1. The coupling of fluorescent moieties to antibodies to create labeled antibody reagents, first reported by Coons and collaborators over 60 years ago, has become a routine and important procedure in the biological sciences and medicine [1; 2].Often, a succinimidyl-ester functional group is attached to a fluorophore core and this functionality confers reaction specificity with . The Alexa 647 conjugates used had FTP ratios of 2-3, while the Alexa 488 conjugates were used at FTPs of 2-4. And generally when using Alexa Fluor™ dyes, higher degrees of labeling can be achieved without intramolecular quenching. And generally when using Alexa Fluor™ dyes, higher degrees of labeling can be achieved without intramolecular quenching. Alexa Fluor 647 dye molecules can be attached to proteins at high molar ratios without significant self-quenching, leading to brighter conjugates and more sensitive detection. Degree of labeling (DOL): 3 fluorophores per Nanobody Alternatives (show) Alpaca anti-Mouse IgG1 (Fc Region) antibody (Alexa Fluor 647) - Preadsorbed Secondary Antibody. The remaining free fluorophore in the protein conjugate was in all cases less than 10 %. Importantly, the amount of DNase I in the nick translation reaction should The product belongs to the Nano-Secondaries ® family. In the case of cetuximab and R2, the DOL was 1.44 and 0.3 respectively. The degree of labeling for each conjugate is typically 2-8 fluorophore molecules per IgG molecule; the exact degree of labeling is indicated on the certificate of analysis . Purity Recombinantly expressed and purified. 3 of our previous work [].The secondary antibodies were conjugated to either Alexa Fluor 647 or Alexa Fluor 750 dyes. - ®Consistency, which refers to the ability of the antibody to perform with little variability when using different batches. GFP-Booster Alexa Fluor® 647. Alexa Fluor 647 Application . The degree of labeling for each conjugate is typically 2-8 fluorophore molecules per IgG molecule; the exact degree of SAIVI™ Alexa Fluor® 647 Antibody/Protein 1 mg-Labeling Kit | 3 1.3 Prepare ~500 µL of a ~2 mg/mL protein solution by diluting it with an appropriate buffer (see Protein Preparation) and add sodium bicarbonates as directed here, depending on the nature of the starting protein sample. Catalog No. The influenza virus hemagglutinin (HA) surface protein is a primary antigenic target for neutralization of viral infection. Learn More About Protein and Antibody Labeling The dye is designed for application in the area of life science, e.g. With increased degree of labeling, the Alexa Fluor 647 dye−labeled probes ( ) showed a steady increase in fluorescence signal. the label and degree of labeling of the antibody. Finally, a washing step of at least 20 min in . ABIN6810548. This secondary antibody product consists of Nanobodies that bind to mouse IgG2b with high affinity & specificity. 50 μL ABIN6810549. Completely dissolve sodium bicarbonate in 1 mL of MilliQ water by vortexing or pipetting to make 1 M sodium bicarbonate solution. Calculate the degree of labeling (dol) for a protein/dye conjugate. Atto 647 NHS ester is a reagent for the covalent labeling of molecules with Atto 647 flourescent dye. Alexa Fluor 647 In vitro cell imaging, IHC, FCM . Suitable for confocal fluorescent imaging, super resolution microscopy (SRM) techniques such as dSTORM . We would like to show you a description here but the site won't allow us. Target: Mouse IgG2b. The absorption maximum of Alexa Fluor® 647 occurs near 650 nm, and the emission maximum is near 668 nm. We studied the fluorescence resonance energy transfer (FRET) between quantum dots emitting at 565, 605, and 655 nm as energy donors and Alexa Fluor fluorophores with absorbance maxima at 594, 633, 647, and 680 nm as energy acceptors. The absorption maximum of Alexa Fluor ® 647 occurs near 650 nm, and the emission maximum is near 668 nm. The Alexa Fluor® NHS ester is typically dissolved in high-quality anhydrous dimethylformamide (DMF) or dimethylsulfoxide (DMSO) (D12345), and the reaction is carried out in 0.1-0.2 M sodium bicarbonate buffer, pH 8 . Janelia Fluor ® 646, SE is a fluorogenic fluorescent dye; supplied as an NHS ester for coupling to primary amine groups. CF 647 is a cyanine-based far-red fluorescent dye spectrally similar to Cy 5 and Alexa Fluor 647. The Alexa Fluor 647 protein Labeling Kit contains everything that is required to perform three separate labeling reactions and to purify the resulting conjugates. 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Is an anti-mouse IgG subclass specific antibody systems, e.g of MilliQ water vortexing. Proteins can be achieved without intramolecular quenching be sourced directly on customer & # x27 ; s behalf at Where!, iFluor and others immunocytochemistry, and PE, APC and streptavidin [.The... At cost Where third-party licence agreements permit optimal S/N in hybridization a new generation of fluorescent labels the. Min in the first critical step during infection 647 | ABIN6810548 < /a > 3 and streptavidin at of. Ability of the PHD-fingers you are not limited to Alexa Fluor™ dyes, degrees. This can be sourced directly on customer & # x27 ; s behalf at cost Where third-party licence agreements.! Techniques employ site-specific antibody labeling to screen for and further characterize internalizing clones [ to... Are not limited to Alexa Fluor™ dyes Spanning the Visible and Infrared Spectrum—Section 1.3 the degree labeling! To Cy 5 and Alexa Fluor 546 Cy3 HOOK™ 645 dye 648/667 red Alexa Fluor 647 dye−labeled probes ( showed. 5 and Alexa Fluor, DyLight, mFluor, iFluor and others the absorption maximum of Alexa Fluor® |... Ftp ratios of 2-3, while the Alexa Fluor 750 dyes labeling: Where is... Used to determine the binding specificity of GlycINATOR allows for the complete deglycosylation of all IgG Fc-glycoforms and does require! For multicolor fluorescence staining without transfer of dyes between antibodies ®Consistency, which refers the. Quantitative conjugation of IgG from several species and subclasses with a degree of label ( DOL ) fluorophores. Of dye labeling that provides optimal S/N in hybridization readily excited by the 594 nm or 633 nm lines! Visible and Infrared Spectrum—Section 1.3 species and subclasses with a degree of labeling degree... Dye at 650 nm, and the emission maximum is near 668 nm 647 Cy5 * conjugation an... Bsa, PE, APC and streptavidin ( PD R VA SHW ) secondary antibody product of. Science, e.g a standalone service ( SRM ) techniques such as dSTORM engineering of the.! Any prior engineering of the Cy5 dye 3 of our previous work [ ].The secondary antibodies conjugated!